MOLECULAR IDENTIFICATION OF NEW LOCAL STRAINS OF BIFIDOBACTERIA AND LACTOBACILLI USING 16S RRNA

Authors

  • Sharipova Z.O. Tashkent research institute of vaccines and serums (Tashkent, Uzbekistan)
  • Yodgorova N.T. Tashkent Medical Academy (Tashkent, Uzbekistan)

Keywords:

Identification of strains, local strains, bifidobacteria, lactobacteria, 16S rRNA, molecular genetic identification, probiotics, gene amplification.

Abstract

In light of the growing interest in using probiotic microorganisms in medicine and the food industry, there is an increasing need to develop effective methods for their identification and characterization. This study presents the results of molecular genetic analysis of newly isolated local strains of bacteria from the genera Bifidobacterium and Lactobacillus, obtained from samples collected in Uzbekistan. For identification purposes, methods of amplification and sequencing of the 16S rRNA gene were used, along with species-specific primers when necessary. The obtained nucleotide sequences were compared with NCBI databases, allowing for precise determination of the taxonomic position of the studied isolates. The research revealed the presence of both widely distributed and unique strains with potential for further application in the development of probiotic preparations. The acquired data contribute to expanding knowledge about the biodiversity of probiotic microflora and highlight the significance of local microbiological resources.

References

Chun J. et al. (2007) Introduction of the EzTaxon database for the identification of prokaryotes based on 16S rRNA gene sequences. International Journal of Systematic and Evolutionary Microbiology, 57(10):2259–2261.

Fouhy F. et al. (2016) The effects of sample processing and primer choice on the accuracy of infant gut microbiota profiling. Microbiome, 4(1):1–11.

Janda J.M., Abbott S.L. (2007) Review of the advantages and limitations of 16S rRNA gene sequencing for bacterial identification in clinical laboratories. Journal of Clinical Microbiology, 45(9):2761–2764.

Jin J. et al. (2020) Development of PCR assays for the specific detection and identification of 37 species of Lactobacillus and Bifidobacterium. BMC Microbiology, 20(1):1–12.

Kim M. et al. (2014) Comparison of average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. International Journal of Systematic and Evolutionary Microbiology, 64(Pt 2):346–351.

Kullen M.J. et al. (2000) Identification and differentiation of probiotic Lactobacillus and Bifidobacterium strains using molecular techniques. Journal of Applied Microbiology, 89(3):511–516.

Matsuki T. et al. (2004) Rapid identification of potentially probiotic Bifidobacterium species by PCR. FEMS Microbiology Letters, 250(1):55–62.

Sakata S. et al. (2023) Development of a rapid PCR-based method for the identification of Lactobacillus acidophilus and Bifidobacterium based on the 16S rRNA gene. Journal of Microbiology and Biotechnology, 33(1):490–496.

Tannock G.W. et al. (2000) Identification of Lactobacillus and Bifidobacterium species in probiotic products using PCR. Applied and Environmental Microbiology, 66(6):2578–2585.

Ventura M. et al. (2001) Review of methods for the identification of Lactobacillus and Bifidobacterium, including the use of the 16S rRNA gene. International Journal of Systematic and Evolutionary Microbiology, 51(2):521–529.

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Published

2025-06-07

How to Cite

Sharipova Z.O., & Yodgorova N.T. (2025). MOLECULAR IDENTIFICATION OF NEW LOCAL STRAINS OF BIFIDOBACTERIA AND LACTOBACILLI USING 16S RRNA. Central Asian Journal of Medicine, (4), 40 - 43. Retrieved from https://mail.journals.tma.uz/index.php/cajm/article/view/1352

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